Changelog

0.2.0

Migrated AICSImageReader / AICSImageWriter from aicsimageio to bioio + bioio-ome-tiff. Public API (class names, method signatures) is unchanged.
Bumped minimum supported Python to 3.10 (required by bioio-ome-tiff).
Fixed a latent bug in AICSImageReader.read_image where the channel=None/plane=not-None code path called .compute() on a plain numpy array.
Added a pytest suite covering AICSImageReader/AICSImageWriter (previously untested).
Added bioio-tifffile as a dependency - bioio-ome-tiff hard-requires valid OME-XML metadata, so it rejects plain TIFFs with none at all (e.g. Cellpose's *_cp_masks.tiff mask output), which broke mask_reader in ProcessedImageProvider after the migration above. BioImage's own plugin auto-detection already falls back to any other registered plugin when one rejects a file, so this fixes mask reading with no code change - bioio-ome-tiff is still preferred (and unaffected) for real OME-TIFF images.
Added rendering for QC report in the tglow pipeline

Should be backwards compatible with 0.1.3.

Added util functions for sigmoid and rescale_stack, rescale_stack_inplace
ProccessedImageProvider now uses rescale_stack_inplace
Removed dependency for basicpy, and replaced with a reader that loads the npz file direct

Did not keep a good record.